PRRN 5.2.0 – Multiple Sequence Alignment by Doubly Nested Randomized Iterative Method

PRRN 5.2.0

:: DESCRIPTION

PRRN is an implementation of the randomized iterative strategy for multiple sequence alignment. Prrn accepts either nucleotide or protein sequences. Prrn repeatedly uses pairwise group-to-group alignment to improve the overall weighted sum-of-pairs score at each iterative step, where the pair weights are introduced to correct for uneven representations of the sequences to be aligned.

::DEVELOPER

Osamu Gotoh

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ compiler

:: DOWNLOAD

 PRRN

:: MORE INFORMATION