DRIVeR – Diversity Resulting from In Vitro Recombination

DRIVeR

:: DESCRIPTION

The program DRIVeR is applicable to libraries generated by recombining two highly homologous parent sequences differing at only a few (e.g. ≤20) nucleotide or amino acid positions.

DRIVeR Online Version

::DEVELOPER

Andrew Firth

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  Windows / MacOsX
  • C++ Compiler
:: DOWNLOAD

 DRIVeR

:: MORE INFORMATION

Citation

AndrewE. Firth, Wayne M. Patrick, 2005,
Statistics of protein library construction,
Bioinformatics, 21, 3314-3315.

PEDEL – Estimate Diversity in Error-prone PCR Libraries

PEDEL

:: DESCRIPTION

PEDEL (Programme for Estimating Diversity in Error-prone PCR Libraries) can be used to calculate the expected number of distinct variants present in a library, given the library size, mean substitution rate and parent sequence length. On the web page, the user may produce plots of the expected number of distinct daughter sequences as a function of library size and substitution rate.

PEDEL Online Version

::DEVELOPER

Andrew Firth

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  Windows / MacOsX
  • C++ Compiler
:: DOWNLOAD

  PEDEL

:: MORE INFORMATION

Citation

AndrewE. Firth, Wayne M. Patrick, 2005,
Statistics of protein library construction,
Bioinformatics, 21, 3314-3315.