PACSY / PACSY Maker b032814 / PACSY Analyzer – Database Management system for Protein Structure and Chemical Shift analysis

PACSY / PACSY Maker b032814 / PACSY Analyzer

:: DESCRIPTION

PACSY (Protein structure And Chemical Shift NMR spectroscopY) is a relational database management system that integrates information from the Protein Database Bank (PDB), the Biological Magnetic Resonance Data Bank (BMRB), and the Structural Classification of Proteins (SCOP) database.

PACSY Maker is used for building the PACSY database.

PACSY Analyzer is designed to provide an easy graphical user interface (GUI) for using PACSY database.

::DEVELOPER

The National Magnetic Resonance Facility at Madison (NMRFAM)

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

PACSYPACSY Maker  , PACSY Analyzer

:: MORE INFORMATION

Citation

J Biomol NMR. 2012 Oct;54(2):169-79. Epub 2012 Aug 19.
PACSY, a relational database management system for protein structure and chemical shift analysis.
Lee W1, Yu W, Kim S, Chang I, Lee W, Markley JL.

PhpLabWare 0.63 – Web-driven Life Sciences Lab Database Management System

PhpLabWare 0.63

:: DESCRIPTION

Phplabware is a web-driven database management system. Phplabware runs on a server and is accessed through a web browser. Databases can be designed within a web-interface. Data-entry takes place in forms, which can be altered using phplabware’s plugin mechanism. Search results can be output in reports, which are generated based on simple HTML templates. Phplabware supports file and image uploads and allows for full-text searches in uploaded materials. A UNIX-like user and group access control mechanism allows for fine-grained read and write control at both the level of a complete database as well as individual records. The (php-based) plugin mechanism allows for easy and fast adaptation of phplabware to any specific needs.

Phplabware was developed at a number of Molecular Biology labs, and therefore ships with predefined databases targeted to the needs of Life Sciences labs. Currently, modules are available for antibodies, protocols, pdfs, pdbs, and files.

::DEVELOPER

Nico StuurmanVale Lab, UCSF

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

PhpLabWare

:: MORE INFORMATION

Demo Database : Symbiodinium Culture Database