DiMO 1.6 / DAMO
:: DESCRIPTION
DiMO is discriminative motif optimizer.
DAMO (Discriminative Additive Model Optimization)is a Python implementation of the Discriminative Motif Optimizer (DiMO) program and extends it to include adjacent di-nucleotide interactions.
::DEVELOPER
Stormo Lab in Department of Genetics, Washington University
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/ MacOsX
- R
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2014 Apr 1;30(7):941-8. doi: 10.1093/bioinformatics/btt748. Epub 2013 Dec 24.
Discriminative motif optimization based on perceptron training.
Patel RY1, Stormo GD.
BMC Bioinformatics. 2018 Mar 6;19(1):86. doi: 10.1186/s12859-018-2104-7.
Comparison of discriminative motif optimization using matrix and DNA shape-based models.
Ruan S, Stormo GD