CTCF-MP – Predicting CTCF-mediated Chromatin Loops

CTCF-MP

:: DESCRIPTION

CTCF-MP predicts if a convergent CTCF motif pair is able to form a chromatin loop using sequence-level features.

::DEVELOPER

Ma Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

CTCF-MP

:: MORE INFORMATION

Citation

Bioinformatics. 2018 Jul 1;34(13):i133-i141. doi: 10.1093/bioinformatics/bty248.
Predicting CTCF-mediated chromatin loops using CTCF-MP.
Zhang R, Wang Y, Yang Y, Zhang Y, Ma J.