:: DESCRIPTION
PconsC is a software of combination of direct information methods and alignments improves contact prediction.
::DEVELOPER
:: SCREENSHOTS
N/A
::REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2013 Jul 15;29(14):1815-6. doi: 10.1093/bioinformatics/btt259. Epub 2013 May 8.
PconsC: combination of direct information methods and alignments improves contact prediction.
Skwark MJ1, Abdel-Rehim A, Elofsson A.
:: DESCRIPTION
PSICOV introduces the use of sparse inverse covariance estimation to the problem of protein contact prediction. The method builds on work which had previously demonstrated corrections for phylogenetic and entropic correlation noise and allows accurate discrimination of direct from indirectly coupled mutation correlations in the MSA.
:DEVELOPER
Bioinformatics Group – University College London
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation:
David T. Jones, Daniel W. A. Buchan, Domenico Cozzetto and Massimiliano Pontil
PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments
Bioinformatics (2012) 28 (2): 184-190.
