CNVer 0.8.1
:: DESCRIPTION
CNVer is a method for CNV detection that supplements the depth-of-coverage with paired-end mapping information, where matepairs mapping discordantly to the reference serve to indicate the presence of variation. CNVer combines this information within a unified computational framework called the donor graph, allowing it to better mitigate the sequencing biases that cause uneven local coverage.
::DEVELOPER
:: SCREENSHOTS
N/A
::REQUIREMENTS
- Linux / MacOsX
:: DOWNLOAD
:: MORE INFORMATION
Citation
Genome Res. 2010 Nov;20(11):1613-22. doi: 10.1101/gr.106344.110. Epub 2010 Aug 30.
Detecting copy number variation with mated short reads.
Medvedev P, Fiume M, Dzamba M, Smith T, Brudno M.