CATCh v1 – Ensemble Classifier for Chimera Detection in 16S rRNA Sequencing Studies

CATCh v1

:: DESCRIPTION

CATCh is an ensemble classifier for chimera detection in 16S rRNA sequencing studies

::DEVELOPER

The Bioinformatics team of the Microbiology Unit, SCK.CEN

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R

:: DOWNLOAD

 CATCh

:: MORE INFORMATION

Citation

Appl Environ Microbiol. 2015 Mar;81(5):1573-84. doi: 10.1128/AEM.02896-14. Epub 2014 Dec 19.
CATCh, an ensemble classifier for chimera detection in 16S rRNA sequencing studies.
Mysara M, Saeys Y, Leys N, Raes J, Monsieurs P

CATCH 3 v513 – Unsupervised Clustering of ChIP profiles

CATCH 3 v513

:: DESCRIPTION

CATCH (Clustering and Alignment Tool for ChIP Profiles) is an tool for exploring patterns in ChIP profiling data. The CATCH algorithm performs a hierachical clustering of the profile patterns with an exhaustive alignment at each step.

::DEVELOPER

Fiona G. Nielsen

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Java

:: DOWNLOAD

 CATCH

:: MORE INFORMATION

Citation

Nielsen FGG, Markus KG, Friborg RM, Favrholdt LM, Stunnenberg HG, et al. (2012)
CATCHprofiles: Clustering and Alignment Tool for ChIP Profiles
PLoS ONE 7(1): e28272. doi:10.1371/journal.pone.0028272