DyGloSA – Dynamical Global parameter Sensitivity Analysis of ODE models of biological systems

DyGloSA

:: DESCRIPTION

DyGloSA is a MATLAB toolbox for dynamical global parameter sensitivity analysis (GPSA) of ordinary differential equations models.

::DEVELOPER

Life Sciences Research Unit, University of Luxembourg

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / Windows/ MacOSX
MatLab

:: DOWNLOAD

DyGloSA

:: MORE INFORMATION

Citation

PLoS One. 2013 Dec 18;8(12):e82973. doi: 10.1371/journal.pone.0082973. eCollection 2013.
Switch of sensitivity dynamics revealed with DyGloSA toolbox for dynamical global sensitivity analysis as an early warning for system’s critical transition.
Baumuratova T, Dobre S, Bastogne T, Sauter T

ALSYSTA 1.07 Beta – Analysis of different Aspects of Biological Systems

ALSYSTA 1.07 Beta

:: DESCRIPTION

ALSYSTA (BioSystAnSe) is a software suite that includes a series of tools for the analysis of different aspects of biological systems, such as the expression phenotype and the metabolic flux profiles of cells, as well as various tools to search web based databases.

::DEVELOPER

The Bioinformatics & Metabolic Engineering Laboratory, Massachusetts Institute of Technology

:: SCREENSHOTS

:: REQUIREMENTS

Windows

:: DOWNLOAD

ALSYSTA

:: MORE INFORMATION

BioNet Reasoning – Modeling Biological Systems

BioNet Reasoning

:: DESCRIPTION

BioNet Reasoning is a command line application for modeling biological systems. It allows to reason, i.e. predict, explain, and plan, about biological systems that are described in the action language C_TAID.

::DEVELOPER

Max Planck Institute for Molecular Plant Physiology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows / Linux / MacOsX
Java

:: DOWNLOAD

BioNet Reasoning

:: MORE INFORMATION