COUDES 1.0 – Prediction of Beta-turns and their Types

COUDES 1.0

:: DESCRIPTION

COUDES (Chercher Où Une Deviation Existe Sûrement.) is a tool for predicting beta-turns and their type in a protein or peptide sequence.

::DEVELOPER

the DSIMB bioinformatic group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

High accuracy prediction of beta-turns and their types using propensities and multiple alignments.
Fuchs PF, Alix AJ.
Proteins. 2005 Jun 1;59(4):828-39.

Betaturns – Prediction of Beta-turn Types

Betaturns

:: DESCRIPTION

 Betaturns predicts the beta turns and their types in a protein from its amino acid sequence

::DEVELOPER

Betaturns Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

A neural network method for prediction of beta-turn types in proteins using evolutionary information.
Kaur H, Raghava GP.
Bioinformatics. 2004 Nov 1;20(16):2751-8. Epub 2004 May 14.

BetaTPred – Predict Beta Turns in Proteins using Existing Statistical methods

BetaTPred

:: DESCRIPTION

The server BetaTPredis developed for predicting Beta-turns in a protein from the amino acid sequence.

::DEVELOPER

BetaTPred Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Kaur, H. and Raghava, G.P.S. (2002)
BetaTpred:Prediction of beta-turns in a protein using statistical algorithms.
Bioinformatics 18:498-9

BTEVAL – Evaluation of beta-turn Prediction

BTEVAL

:: DESCRIPTION

The aim of BTEVAL server is to evaluate beta turn prediction algorithms on a uniform data set of 426 proteins or subsets of these proteins. It is the new data set in which no two protein chains have more that 25% sequence identity and each chain contains minimum one beta turn.

::DEVELOPER

Dr. G P S Raghava

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Kaur, H. and Raghava, G.P.S. (2003)
BTEVAL: A server for evaluation of beta-turn prediction methods.
Journal of Bioinformatics and Computational Biology 3(1), 495-504.