BNFinder 2.1.1 – Bayesian Network Topology Inference

BNFinder 2.1.1

:: DESCRIPTION

BNFinder (Bayesian Network Finder) allows for Bayesian network reconstruction from experimental data. It supports dynamic Bayesian networks and, if the variables are partially ordered, also static Bayesian networks.

::DEVELOPER

CompBio@MIMUW

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Linux / Windows/ MacOsX
Python

:: DOWNLOAD

BNFinder

:: MORE INFORMATION

Citation

BNFinder2: Faster Bayesian network learning and Bayesian classification.
Dojer N, Bednarz P, Podsiadlo A, Wilczynski B.
Bioinformatics. 2013 Aug 15;29(16):2068-70. doi: 10.1093/bioinformatics/btt323.

Bioinformatics. 2009 Jan 15;25(2):286-7. doi: 10.1093/bioinformatics/btn505. Epub 2008 Sep 30.
BNFinder: exact and efficient method for learning Bayesian networks.
Wilczyński B, Dojer N.

BNArray 1.0 – Constructing Gene Regulatory Networks from Microarray data by using Bayesian network

BNArray 1.0

:: DESCRIPTION

BNArray is a systemized tool developed in R. It facilitates the construction of gene regulatory networks from DNA microarray data by using Bayesian network. Significant submodules of regulatory networks with high confidence are reconstructed using our extended sub-network mining algorithm for directed graphs.

::DEVELOPER

Ming Chen’s Bioinformatics Group, Zhejiang University.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows / Linux/MacOsX
R package

:: DOWNLOAD

BNArray

:: MORE INFORMATION

Citation

Bioinformatics. 2006 Dec 1;22(23):2952-4.
BNArray: an R package for constructing gene regulatory networks from microarray data by using Bayesian network.
Chen X, Chen M, Ning K.