:: DESCRIPTION
fourSig is a suite of programs for analyzing and visualizing 4C-seq data.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
fourSig: a method for determining chromosomal interactions in 4C-Seq data.
Williams RL Jr, Starmer J, Mugford JW, Calabrese JM, Mieczkowski P, Yee D, Magnuson T.
Nucleic Acids Res. 2014 Apr;42(8):e68. doi: 10.1093/nar/gku156.
:: DESCRIPTION
Basic4Cseq is an R/Bioconductor package for basic filtering, analysis and subsequent visualization of 4C-seq data. Virtual fragment libraries can be created for any BSGenome package, and filter functions for both reads and fragments and basic quality controls are included.
::DEVELOPER
Carolin Walter <carolin.walter at uni-muenster.de>
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2014 Jul 30. pii: btu497. [Epub ahead of print]
Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data.
Walter C, Schuetzmann D, Rosenbauer F, Dugas M.
