T-WPPDC – Tree-based Weighted-Position Pattern Discovery and Classification

T-WPPDC

:: DESCRIPTION

T-WPPDC is a minimally parameterized algorithm for both pattern discovery and sequence classification that directly incorporates positional information.

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::DEVELOPER

Jurisica Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 T-WPPDC 

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Aug 1;27(15):2054-61. doi: 10.1093/bioinformatics/btr353. Epub 2011 Jun 17.
A tree-based approach for motif discovery and sequence classification.
Yan R1, Boutros PC, Jurisica I.