SWITCHdna

:: DESCRIPTION

SWITCHdna (SupWald Identification of dna-copy Changes) is a software to identify regions of Copy Number Aberrations (CNAs) based on intensity data generated from copy number platforms. The SWITCHdna method performs identification of transition points followed by significance testing of defined segments.

Andrey A. Shabalin

:: SCREENSHOTS

N/A

::REQUIREMENTS

• Linux/Windows/MacOsX
• R Package

:: DOWNLOAD

 SWITCHdna

:: MORE INFORMATION

Citation

Basal-like Breast Cancer DNA copy number losses identify genes involved in genomic instability, response to therapy, and patient survival.
V.J. Weigman, H. H. Chao, A.A. Shabalin, et al.
Breast Cancer Research and Treatment, 2 Nov 2011 pp. 1-16.