SUMOsp 2.0.4 / GPS-SUMO 1.0 – SUMOylation sites Prediction

SUMOsp 2.0.4 / GPS-SUMO 1.0

:: DESCRIPTION

SUMOsp  based on a manually curated dataset, integrating the results of two methods, GPS and MotifX, which were originally designed for phosphorylation site prediction. SUMOsp offers at least as good prediction performance as the only available method, SUMOplot, on a very large test set. We expect that the prediction results of SUMOsp combined with experimental verifications will propel our understanding of sumoylation mechanisms to a new level.

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GPS-SUMO is a tool for the prediction of sumoylation sites and SUMO-interaction motifs.

::DEVELOPER

The CUCKOO Workgroup

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux / WIndows / MacOsX
  • Java

:: DOWNLOAD

 SUMOsp , GPS-SUMO

:: MORE INFORMATION

Citation

GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs.
Zhao Q, Xie Y, Zheng Y, Jiang S, Liu W, Mu W, Liu Z, Zhao Y, Xue Y, Ren J.
Nucleic Acids Res. 2014 May 31. pii: gku383

Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0.
Jian Ren, Xinjiao Gao, Changjiang Jin, Mei Zhu, Xiwei Wang, Andrew Shaw, Longping Wen, Xuebiao Yao and Yu Xue.
Proteomics.2009; 9:3409-3412

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