Stacks 2.59

:: DESCRIPTION

Stacks is a software pipeline for building loci out of a set of short-read sequenced samples. Stacks was developed for the purpose of building genetic maps from RAD-Tag Illumina sequence data, but can also be readily applied to population studies, and phylogeography.

DEVELOPER

Cresko labs

:: SCREENSHOTS

:: REQUIREMENTS

• Linux / MacOsX
• MySQL
• Perl 
• MDB2 Pear Module

:: DOWNLOAD

 Stacks

:: MORE INFORMATION

Citation:

J. Catchen, A. Amores, P. Hohenlohe, W. Cresko, and J. Postlethwait.
Stacks: building and genotyping loci de novo from short-read sequences.
G3: Genes, Genomes, Genetics, 1:171-182, 2011