SPICi – Fast Biological Network Clustering Algorithm

SPICi

:: DESCRIPTION

SPICi (Speed and Performance In Clustering) is a fast local network clustering algorithm. SPICi runs in time O(Vlog V +E) and space O(E), where V and E are the number of vertices and edges in the network. It also has state-of the-art performance with respect to the quality of the clusters it uncovers.

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::DEVELOPER

Mona Singh

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 SPICi

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Apr 15;26(8):1105-11. doi: 10.1093/bioinformatics/btq078. Epub 2010 Feb 24.
SPICi: a fast clustering algorithm for large biological networks.
Jiang P1, Singh M.