SPEER 201010 – Prediction of Protein Specificity Determining Sites

SPEER 201010

:: DESCRIPTION

‘SPEER-SERVER‘ (Specificity prediction using amino acids’ Properties, Entropy and Evolution Rate) is a web server that encodes the specific conservation pattern of amino acid types in a protein family to identify the specificity determining sites (SDS). The specific conservation pattern is predicted using amino acids’ physico-chemical properties, relative entropy and the evolutionary rates between the protein subfamilies.

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::DEVELOPER

SPEER team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • C++ Compiler

:: DOWNLOAD

  SPEER

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W242-8. doi: 10.1093/nar/gks559. Epub 2012 Jun 11.
SPEER-SERVER: a web server for prediction of protein specificity determining sites.
Chakraborty A, Mandloi S, Lanczycki CJ, Panchenko AR, Chakrabarti S.