SNP ratio test v3
:: DESCRIPTION
The SNP ratio test (SRT) can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses.
Advertisement
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX / Windows
- Perl
- Plink
:: DOWNLOAD
:: MORE INFORMATION
Citation
The SNP ratio test: pathway analysis of genome-wide association datasets.
O’Dushlaine C, Kenny E, Heron EA, Segurado R, Gill M, Morris DW, Corvin A.
Bioinformatics. 2009 Oct 15;25(20):2762-3. doi: 10.1093/bioinformatics/btp448. Epub 2009 Jul 20.