SnowyOwl 2.1.0 – RNA-Seq based Gene Prediction pipeline for Fungal Genomes

SnowyOwl 2.1.0

:: DESCRIPTION

SnowyOwl is a gene prediction pipeline that uses RNA-Seq data to train and provide hints for the generation of Hidden Markov Model (HMM)-based gene predictions, and to evaluate the resulting models.

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::DEVELOPER

SnowyOwl team

:: SCREENSHOTS

SnowyOwl

:: REQUIREMENTS

  • Linux
  • Perl
  • Python

:: DOWNLOAD

 SnowyOwl

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2014 Jul 1;15:229. doi: 10.1186/1471-2105-15-229.
SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.
Reid I, O’Toole N, Zabaneh O, Nourzadeh R, Dahdouli M, Abdellateef M, Gordon PM, Soh J, Butler G, Sensen CW, Tsang A.