SMAT is an R package for performing the Scaled Multiple-phenotype Association Test in cohort or case-control designs to assess common effect of a single nucleotide polymorphism (SNP) on multiple (positively correlated) continuous outcomes measuring the same underlying trait.
Xihong Lin’s Group, Harvard School of Public Health
- Linux / Windows / MacOsX
- R Package
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Genome-wide Association Analysis for Multiple Continuous Secondary Phenotypes.
Schifano ED, Li L, Christiani DC, Lin X.
Am J Hum Genet. 2013 May 2;92(5):744-59.