SeroBA 1.0.1
:: DESCRIPTION
SeroBA is a k-mer based Pipeline to identify the Serotype from Illumina NGS reads for given references.
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::DEVELOPER
Pathogen Informatics, Wellcome Trust Sanger Institute
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
SeroBA: rapid high-throughput serotyping of Streptococcus pneumoniae from whole genome sequence data.
Epping L, van Tonder AJ, Gladstone RA, The Global Pneumococcal Sequencing Consortium, Bentley SD, Page AJ, Keane JA.
Microb Genom. 2018 Jul;4(7). doi: 10.1099/mgen.0.000186. Epub 2018 Jun 15.