Selfish – Discovery of Differential Chromatin Interactions via a Self-Similarity Measure

Selfish

:: DESCRIPTION

SELFISH is a tool for finding differential chromatin interactions between two Hi-C contact maps. It uses self-similarity to model interactions in a robust way.

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::DEVELOPER

Lonardi Bioinformatics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Matlab

:: DOWNLOAD

SELFISH

:: MORE INFORMATION

Citation

Ardakany AR, Ay F, Lonardi S.
Selfish: discovery of differential chromatin interactions via a self-similarity measure.
Bioinformatics. 2019 Jul 15;35(14):i145-i153. doi: 10.1093/bioinformatics/btz362. PMID: 31510653; PMCID: PMC6612869.

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