scRNABatchQC v0.10.3
:: DESCRIPTION
scRNABatchQC is an R package for generating a HTML QC report to check and compare quality of multiple single cell RNA-seq datasets. scRNABatchQC supports multiple types of inputs, including gene-cell count matrices, 10x genomics, SingleCellExperiment or Seurat v3 objects.
Advertisement
::DEVELOPER
:: REQUIREMENTS
- Linux
- R
:: DOWNLOAD
:: MORE INFORMATION
Citation
Liu Q, Sheng Q, Ping J, Ramirez MA, Lau KS, Coffey RJ, Shyr Y.
scRNABatchQC: multi-samples quality control for single cell RNA-seq data.
Bioinformatics. 2019 Dec 15;35(24):5306-5308. doi: 10.1093/bioinformatics/btz601. PMID: 31373345; PMCID: PMC6954654.