scarpa 0.241
:: DESCRIPTION
Scarpa is a stand-alone scaffolding tool for NGS data. It can be used together with virtually any genome assembler and any NGS read mapper that supports SAM format. Other features include support for multiple libraries and an option to estimate insert size distributions from data.
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::DEVELOPER
Nilgun Donmez and Michael Brudno
:: SCREENSHOTS
N/A
::REQUIREMENTS
- Linux
- Perl
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2013 Feb 15;29(4):428-34. doi: 10.1093/bioinformatics/bts716. Epub 2012 Dec 29.
SCARPA: scaffolding reads with practical algorithms.
Donmez N, Brudno M.