SANA

:: DESCRIPTION

SANA is an algorithm for the alignment of two proteins. Specifically, core regions in two protein structures are first aligned by identifying connected components in a network of neighboring, geometrically compatible aligned fragment pairs (AFPs). The initial alignments then are refined through a multi-objective optimization method. The algorithm can produce both sequential and non-sequential alignments.

::DEVELOPER

APORC

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows

:: DOWNLOAD

   SANA

:: MORE INFORMATION

Citation

Lin Wang, Ling-Yun Wu, Xiang-Sun Zhang, Luonan Chen.
SANA: an algorithm for sequential and non-sequential protein structure alignment.
Amino Acids. 2010 Jul;39(2):417-25. Epub 2010 Feb 2.