RSEARCH 1.1
:: DESCRIPTION
RSEARCH aligns an RNA query to target sequences, using SCFG algorithms to score both secondary structure and primary sequence alignment simultaneously. It’s slow, but somewhat more capable of finding significant remote RNA structure homologies than sequence alignment methods like BLAST.
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::DEVELOPER
Robbie Klein, Eddy lab
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- C Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Robert J Klein and Sean R Eddy
RSEARCH: Finding homologs of single structured RNA sequences
BMC Bioinformatics 2003, 4:44