RME 1.1 – RNA Secondary Structure Prediction incorporating Experimental Constraints

RME 1.1

:: DESCRIPTION

RME predict RNA secondary structure by integrating the free energy model with probing data (SHAPE, PARS, DMS).

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::DEVELOPER

Lu Lab, School of Life Sciences, Tsinghua University, China

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 RME

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2015 Sep 3;43(15):7247-59. doi: 10.1093/nar/gkv706. Epub 2015 Jul 13.
Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data.
Wu Y, Shi B, Ding X, Liu T, Hu X, Yip KY, Yang ZR, Mathews DH, Lu ZJ