REEF

:: DESCRIPTION

REEF (REgionally Enriched Features) is a tool that uses a genome scan method in order to find chromosomal regions in which a specific features class is enriched. A feature class may be based on whatever sequence characteristics. For instance, it may consist of a class of genes, defined by analysis of gene expression or by involvement of gene products in specific pathways or interaction groups.

::DEVELOPER

Human Genetics, Bioinformatics and Computational Genomics Group , Biology Department, Padova University

:: SCREENSHOTS

:: REQUIREMENTS

• Linux / Windows / MacOsX
• Python
• wxPython
• SciPy

:: DOWNLOAD

 REEF

:: MORE INFORMATION

Citation:

Coppe A., Danieli G.A. and Bortoluzzi S.
REEF: searching REgionally Enriched Features in genomes.
BMC BIOINFORMATICS. 7: 453.