Recycler v0.7

:: DESCRIPTION

Recycler is a tool for extracting cyclical sequences from assembly graphs that are likely to be plasmids, phages, or other mobile elements that are physically separate from their host genomes. It can be applied on isolate, metagenome, and plasmidome graphs.

::DEVELOPER

Ron Shamir’s lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Python

:: DOWNLOAD

Recycler

:: MORE INFORMATION

Citation

Bioinformatics. 2017 Feb 15;33(4):475-482. doi: 10.1093/bioinformatics/btw651.
Recycler: an algorithm for detecting plasmids from de novo assembly graphs.
Rozov R, Brown Kav A, Bogumil D, Shterzer N, Halperin E, Mizrahi I, Shamir R.