QualiMap 2.2.1
:: DESCRIPTION
Qualimap is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data.
::DEVELOPER
The Genomics of Gene Expression Lab
:: SCREENSHOTS
:: REQUIREMENTS
- Linux / Windows/ MacOsX
- Java
- R package
:: DOWNLOAD
:: MORE INFORMATION
Citation
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.
Okonechnikov K, Conesa A, García-Alcalde F.
Bioinformatics. 2015 Oct 1. pii: btv566
Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22.
Qualimap: evaluating next-generation sequencing alignment data.
García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A.