Phigaro v2.3.0

:: DESCRIPTION

Phigaro is a standalone command-line application that is able to detect prophage regions taking raw genome and metagenome assemblies as an input. It also produces dynamic annotated “prophage genome maps” and marks possible transposon insertion spots inside prophages. It is applicable for mining prophage regions from large metagenomic datasets.

::DEVELOPER

Prof Zdobnov Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Python

:: DOWNLOAD

Phigaro

:: MORE INFORMATION

Citation

Starikova EV, Tikhonova PO, Prianichnikov NA, Rands CM, Zdobnov EM, Ilina EN, Govorun VM.
Phigaro: high-throughput prophage sequence annotation.
Bioinformatics. 2020 Jun 1;36(12):3882-3884. doi: 10.1093/bioinformatics/btaa250. PMID: 32311023.