PEP – Predict Enhancer Promoter interactions

PEP

:: DESCRIPTION

PEP is a framework for predicting long-range enhancer-promoter interactions (EPI) incorporating two strategies for extracting features directly from the DNA sequences of enhancer and promoter elements

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::DEVELOPER

Ma Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

PEP

:: MORE INFORMATION

Citation

Exploiting sequence-based features for predicting enhancer-promoter interactions.
Yang Y, Zhang R, Singh S, Ma J.
Bioinformatics. 2017 Jul 15;33(14):i252-i260. doi: 10.1093/bioinformatics/btx257

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