PEDI – Scalable Parameter Estimation of Gene Circuit models

PEDI

:: DESCRIPTION

PEDI (Parameter Estimation by Decomposition and Integration) is a novel framework for efficient and scalable parameter estimation that focuses specifically on modeling of gene circuits.

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::DEVELOPER

Structural and Functional Bioinformatics Group, King Abdullah University of Science and Technology

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • MatLab

:: DOWNLOAD

  PEDI

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Jul 1;29(13):i98-107. doi: 10.1093/bioinformatics/btt232.
A framework for scalable parameter estimation of gene circuit models using structural information.
Kuwahara H1, Fan M, Wang S, Gao X.