PeakRanger 1.18 – Multi-purpose, ultrafast ChIP Seq Peak Caller

PeakRanger 1.18

:: DESCRIPTION

PeakRanger detects enriched regions from ChIP-Seq experiments and also detect summits within these regions. The software is faster than most existing peak callers while consuming less memories.

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::DEVELOPER

developed in Dr.Lincoln Stein’s lab at OICR and is now in continual development at Dr.Helen Hobbs’s lab of the McDermott Center of UT Southwestern.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/ MacOsX
  • C++ Compiler

:: DOWNLOAD

 PeakRanger

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2011 May 9;12:139. doi: 10.1186/1471-2105-12-139.
PeakRanger: a cloud-enabled peak caller for ChIP-seq data.
Feng X, Grossman R, Stein L.