PDEGEM 20140325 – Modeling non-uniform Read Distribution in RNA-seq data

PDEGEM 20140325

:: DESCRIPTION

PDEGEM (Positional Dependent Energy Guided Expression Model ) is a robust nonlinear regression model to estimate the abundance of transcripts

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::DEVELOPER

Minghua Deng

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • R

:: DOWNLOAD

 PDEGEM

:: MORE INFORMATION

Citation

BMC Med Genomics. 2015 May 29;8 Suppl 2:S14. doi: 10.1186/1755-8794-8-S2-S14. Epub 2015 May 29.
PDEGEM: Modeling non-uniform read distribution in RNA-Seq data.
Xia Y, Wang F, Qian M, Qin Z, Deng M.