PCSHMM 1.1 – Structural Alignment of RNAs using Profile-csHMMs

PCSHMM 1.1

:: DESCRIPTION

PCSHMM (Profile-csHMM, Profile Context-Sensitive HMM) is a software for finding structural alignment of RNAs including pseudoknots based on profile-csHMMs

Advertisement

::DEVELOPER

Byung-Jun Yoon

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX

:: DOWNLOAD

 PCSHMM

:: MORE INFORMATION

Citation

Structural alignment of RNAs using profile-csHMMs and its application to RNA homology search: Overview and new results
Byung-Jun Yoon and P. P. Vaidyanathan,
IEEE Transactions on Circuits and Systems: Part-I, IEEE Transactions on Automatic Control (Joint Special Issue on Systems Biology), vol. 53, pp. 10-25, Jan. 2008.