PCAdmix 1.0 – Local Ancestry Deconvolution

PCAdmix 1.0

:: DESCRIPTION

PCAdmix is a method that estimates local ancestry via principal components analysis (PCA) using phased haplotypes.  The method considers data chromosome by chromosome.

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:: DEVELOPER

the Bustamante Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows

:: DOWNLOAD

  PCAdmix

:: MORE INFORMATION

Citation

Hum Biol. 2012 Aug;84(4):343-64. doi: 10.3378/027.084.0401.
PCAdmix: principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations.
Brisbin A1, Bryc K, Byrnes J, Zakharia F, Omberg L, Degenhardt J, Reynolds A, Ostrer H, Mezey JG, Bustamante CD.