PathoGiST v0.3.6 – Clustering Pathogen Isolates by combining multiple Genotyping Signals

PathoGiST v0.3.6

:: DESCRIPTION

PathOGiST is an algorithmic framework for clustering bacterial isolates by leveraging multiple genotypic signals and calibrated thresholds.

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::DEVELOPER

Computational Methods for Paleogenomics and Comparative Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • conda

:: DOWNLOAD

PathOGiST

:: MORE INFORMATION

Citation

Katebi M. et al. (2020)
PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals.
Algorithms for Computational Biology. AlCoB 2020. Lecture Notes in Computer Science, vol 12099. Springer, Cham. https://doi.org/10.1007/978-3-030-42266-0_9

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