Off-Spotter 0.2.2 – very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs

Off-Spotter 0.2.2

:: DESCRIPTION

Off-Spotteris a tool that when presented with a candidate gRNA and a PAM, quickly and exhaustively identifies all genomic sites that are identical or nearly-identical to the gRNA and also satisfy the PAM constraint.

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::DEVELOPER

the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Java

:: DOWNLOAD

Off-Spotter

:: MORE INFORMATION

Citation:

“Off-Spotter: very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs“,
Venetia Pliatsika and Isidore Rigoutsos.
Biol. Direct. 2015;10 :4. doi: 10.1186/s13062-015-0035-z.