sweepsims 0.1.2 – Coalescent Simulation Software

sweepsims 0.1.2

:: DESCRIPTION

sweepsims is the source code from Thornton and Jensen (2007) Controlling the false-positive rate in multilocus genome scans for selection.

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::DEVELOPER

Thornton Lab at UC Irvine

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • C++ Compiler

:: DOWNLOAD

 sweepsims

:: MORE INFORMATION

Citation

Genetics. 2007 Oct;177(2):987-1000.
The neutral coalescent process for recent gene duplications and copy-number variants.
Thornton KR.

Genetics. 2007 Feb;175(2):737-50.
Controlling the false-positive rate in multilocus genome scans for selection.
Thornton KR, Jensen JD.

PLoS Genet. 2008 Sep 19;4(9):e1000198. doi: 10.1371/journal.pgen.1000198.
An approximate bayesian estimator suggests strong, recurrent selective sweeps in Drosophila.
Jensen JD, Thornton KR, Andolfatto P.