mrCaNaVaR 0.51

:: DESCRIPTION

mrCaNaVaR is a copy number caller that analyzes the whole-genome next-generation sequence mapping read depth to discover large segmental duplications and deletions. It also has the capability of predicting absolute copy numbers of genomic intervals.

::DEVELOPER

Can Alkan 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux/MacOsX
• mrFAST / mrsFAST
• C Complier

:: DOWNLOAD

 mrCaNaVaR

:: MORE INFORMATION

Citation

Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler.
Personalized copy number and segmental duplication maps using next-generation sequencing.
Nature Genetics, Oct, 41(10):1061-1067, 2009.