MMSEQ 1.0.2

:: DESCRIPTION

MMSEQ deconvolves the mapping of reads to multiple transcripts (isoforms or haplotype-specific isoforms). The software can take into account non-uniform read generation and works with paired-end reads.

::DEVELOPER

Dr Ernest Turro

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / Windows/ MacOsX
• R package

:: DOWNLOAD

 MMSEQ

:: MORE INFORMATION

Citation

Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads.
Turro E, Su SY, Gonçalves Â, Coin LJ, Richardson S, Lewin A.
Genome Biol. 2011;12(2):R13. Epub 2011 Feb 10.