MLTreeMap 2.061
:: DESCRIPTION
MLTreeMap is a tool that employs full maximum likelihood to give insights into phylogenetic and functional properties of metagenomes and the underlying microbial communities. It does so by detecting and phylotyping a series of relevant marker genes on the submitted DNA fragments. Among these genes are protein coding phylogenetic markers, SSU rRNA genes and markers for important functional pathways.
::DEVELOPER
Christian von Mering (mering@imls.uzh.ch)
:: SCREENSHOTS
n/a
:: REQUIREMENTS
- Linux
- Blast
- Gblocks
:: DOWNLOAD
:: MORE INFORMATION
Citation
MLTreeMap–accurate Maximum Likelihood placement of environmental DNA sequences into taxonomic and functional reference phylogenies.
Stark M, Berger SA, Stamatakis A, von Mering C.
BMC Genomics. 2010 Aug 5;11:461. doi: 10.1186/1471-2164-11-461.