Migrate 4.4.3

:: DESCRIPTION

Migrate estimates effective population sizes and past migration rates between n population assuming a migration matrix model with asymmetric migration rates and different subpopulation sizes. Migrate uses maximum likelihood or Bayesian inference to jointly estimate all parameters.

It can use the following data types:

• Sequence data using Felsenstein’s 84 model with or without site rate variation,
• Single nucleotide polymorphism data (sequence-like data input, HAPMAP-like data input)
• Microsatellite data using a stepwise mutation model or a brownian motion mutation model (using the repeatlength input format or the fragment-length input format),
• Electrophoretic data using an ‘infinite’ allele model.

::DEVELOPER

Peter Beerli

:: SCREENSHOTS

:: REQUIREMENTS

• Windows / MacOs / Linux / Unix

:: DOWNLOAD

Migrate-N

:: MORE INFORMATION

Citation

Population Genetic Inference With MIGRATE.
Beerli P, Mashayekhi S, Sadeghi M, Khodaei M, Shaw K.
Curr Protoc Bioinformatics. 2019 Dec;68(1):e87. doi: 10.1002/cpbi.87.