mf2q – Calculating Scaled Q matrices from Mutation Counts using the DCFreq method

mf2q

:: DESCRIPTION

mf2q is a Python script calculating Q matrices scaled to give one expected substitution per unit time from mutation count data using the DCFreq method.

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::DEVELOPER

Botond Sipos

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Python

:: DOWNLOAD

 mf2q

:: MORE INFORMATION

Citation

Kosiol C., Goldman N. (2005)
Different versions of the Dayhoff rate matrix.
Mol Biol Evol 22:193-199