IMSindel

:: DESCRIPTION

IMSindel is an accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.

::DEVELOPER

Laboratory for Medical Science Mathematics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Ruby

:: DOWNLOAD

IMSindel

:: MORE INFORMATION

Citation

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.
Shigemizu D, Miya F, Akiyama S, Okuda S, Boroevich KA, Fujimoto A, Nakagawa H, Ozaki K, Niida S, Kanemura Y, Okamoto N, Saitoh S, Kato M, Yamasaki M, Matsunaga T, Mutai H, Kosaki K, Tsunoda T.
Sci Rep. 2018 Apr 4;8(1):5608. doi: 10.1038/s41598-018-23978-z. Erratum in: Sci Rep. 2018 Jul 4;8(1):10367.