HotspotFisher

:: DESCRIPTION

HotspotFisher is a package for detecting recombination hotspots from population polymorphism data. HotspotFisher uses a multi-hotspot model and the truncated weighted pairwise log-likelihood (TWPLL), so it can detect multiple hotspots in a region. HotspotFisher can be used to both phased/haplotype and unphased/genotype data directly, with arbitrary levels of missing data.

::DEVELOPER

Jun Li

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / WIndows

:: DOWNLOAD

 HotspotFisher

:: MORE INFORMATION

Citation

Jun Li, Michael Q Zhang, Xuegong Zhang (2006)
A New Method for Detecting Human Recombination Hotspots and Its Applications to the HapMap ENCODE Data.
The American Journal of Human Genetics 79:628-639.