HASLR – Fast Hybrid Assembly of Long Reads

HASLR

:: DESCRIPTION

HASLR is a tool for rapid genome assembly of long sequencing reads. HASLR is a hybrid tool which means it requires long reads generated by Third Generation Sequencing technologies (such as PacBio or Oxford Nanopore) together with Next Generation Sequencing reads (such as Illumina) from the same sample

Advertisement

::DEVELOPER

Computational Methods for Paleogenomics and Comparative Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

HASLR

:: MORE INFORMATION

Citation

Haghshenas E, Asghari H, Stoye J, Chauve C, Hach F.
HASLR: Fast Hybrid Assembly of Long Reads.
iScience. 2020 Aug 21;23(8):101389. doi: 10.1016/j.isci.2020.101389. Epub 2020 Jul 25. PMID: 32781410; PMCID: PMC7419660.

Leave a Reply

Your email address will not be published.

This site uses Akismet to reduce spam. Learn how your comment data is processed.