FUCHS 0.3.0 – FUll circular RNA CHaracterization from RNA-Seq

FUCHS 0.3.0

:: DESCRIPTION

FUCHS is a python pipeline designed to fully characterize circular RNAs. It uses a list of circular RNAs and reads spanning the back-splice junction as well as a BAM file containing the mapping of all reads (alternatively of all chimeric reads).

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::DEVELOPER

Dieterich lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux
  • Python

:: DOWNLOAD

FUCHS

:: MORE INFORMATION

Citation

Metge F, Czaja-Hasse LF, Reinhardt R, Dieterich C.
FUCHS-towards full circular RNA characterization using RNAseq.
PeerJ. 2017 Feb 28;5:e2934. doi: 10.7717/peerj.2934. PMID: 28265491; PMCID: PMC5333540.

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